JBPC Publications 2021
Schauberger C, Glud RN, Hausmann B, Trouche B, Maignien L, Poulain J, Wincker P, Arnaud-Haond S, Wenzhöfer F, Thamdrup B. Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients. ISME J. 2021 Dec;15(12):3455-3467. doi: 10.1038/s41396-021-01021-w. Epub 2021 Jun 8. PMID: 34103697; PMCID: PMC8629969.
Amaral-Zettler LA. Latitudinal Diversity Gradients (LDGs) and macroalgal microbiomes: A chimera of biotic and abiotic effects? J Phycol. 2021 Dec;57(6):1679-1680. doi: 10.1111/jpy.13208. PMID: 34875101.
Thamdrup B, Schauberger C, Larsen M, Trouche B, Maignien L, Arnaud-Haond S, Wenzhöfer F, Glud RN. Anammox bacteria drive fixed nitrogen loss in hadal trench sediments. Proc Natl Acad Sci U S A. 2021 Nov 16;118(46):e2104529118. doi: . PMID: 34764222; PMCID: PMC8609620.
Trouche B, Brandt MI, Belser C, Orejas C, Pesant S, Poulain J, Wincker P, Auguet JC, Arnaud-Haond S, Maignien L. Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria and Archaea Along a Mediterranean-Atlantic Gradient. Front Microbiol. 2021 Nov 1;12:702016. doi: . PMID: 34790173; PMCID: PMC8591283.
Perera D, McLean A, Morillo-López V, Cloutier-Leblanc K, Almeida E, Cabana K, Mark Welch J, Ramsey M. Mechanisms underlying interactions between two abundant oral commensal bacteria. ISME J. 2021 Nov 3. doi: . Epub ahead of print. PMID: 34732850.
Craig RJ, Yushenova IA, Rodriguez F, Arkhipova IR. An Ancient Clade of Penelope-Like Retroelements with Permuted Domains Is Present in the Green Lineage and Protists, and Dominates Many Invertebrate Genomes. Mol Biol Evol. 2021 Oct 27;38(11):5005-5020. doi: . PMID: 34320655; PMCID: PMC8557442.
Raposeiro PM, Hernández A, Pla-Rabes S, Gonçalves V, Bao R, Sáez A, Shanahan T, Benavente M, de Boer EJ, Richter N, Gordon V, Marques H, Sousa PM, Souto M, Matias MG, Aguiar N, Pereira C, Ritter C, Rubio MJ, Salcedo M, Vázquez-Loureiro D, Margalef O, Amaral-Zettler LA, Costa AC, Huang Y, van Leeuwen JFN, Masqué P, Prego R, Ruiz-Fernández AC, Sanchez-Cabeza JA, Trigo R, Giralt S. Climate change facilitated the early colonization of the Azores Archipelago during medieval times. Proc Natl Acad Sci U S A. 2021 Oct 12;118(41):e2108236118. doi: . PMID: 34607952; PMCID: PMC8522277.
Mika K, Okamoto AS, Shubin NH, Mark Welch DB. Bacterial community dynamics during embryonic development of the little skate (Leucoraja erinacea). Anim Microbiome. 2021 Oct 13;3(1):72. doi: . PMID: 34645528; PMCID: PMC8513177.
Yu EM, Yoshinaga T, Jalufka FL, Ehsan H, Mark Welch DB, Kaneko G. The complex evolution of the metazoan HSP70 gene family. Sci Rep. 2021 Sep 7;11(1):17794. doi: . PMID: 34493758; PMCID: PMC8423806.
Stelzer CP, Blommaert J, Waldvogel AM, Pichler M, Hecox-Lea B, Mark Welch DB. Comparative analysis reveals within-population genome size variation in a rotifer is driven by large genomic elements with highly abundant satellite DNA repeat elements. BMC Biol. 2021 Sep 16;19(1):206. doi: . PMID: 34530817; PMCID: PMC8447722.
Miyoshi J, Miyoshi S, Delmont TO, Cham C, Lee STM, Sakatani A, Yang K, Shan Y, Kennedy M, Kiefl E, Yousef M, Crosson S, Sogin M, Antonopoulos DA, Eren AM, Leone V, Chang EB. Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10-/- Mice. Gastroenterology. 2021 Sep;161(3):940-952.e15. doi: . Epub 2021 Jun 7. PMID: 34111469.
Dibner RR, Weaver AM, Brock MT, Custer GF, Morrison HG, Maignien L, Weinig C. Time outweighs the effect of host developmental stage on microbial community composition. FEMS Microbiol Ecol. 2021 Aug 18;97(9):fiab102. doi: . PMID: 34259857.
Amaral-Zettler LA, Ballerini T, Zettler ER, Asbun AA, Adame A, Casotti R, Dumontet B, Donnarumma V, Engelmann JC, Frère L, Mansui J, Philippon M, Pietrelli L, Sighicelli M. Diversity and predicted inter- and intra-domain interactions in the Mediterranean Plastisphere. Environ Pollut. 2021 Oct 1;286:117439. doi: . Epub 2021 Jun 2. PMID: 34438479.
Nguyen QP, Karagas MR, Madan JC, Dade E, Palys TJ, Morrison HG, Pathmasiri WW, McRitche S, Sumner SJ, Frost HR, Hoen AG. Associations between the gut microbiome and metabolome in early life. BMC Microbiol. 2021 Aug 28;21(1):238. doi: . PMID: 34454437; PMCID: PMC8400760.
Hunter-Cevera KR, Hamilton BR, Neubert MG, Sosik HM. Seasonal environmental variability drives microdiversity within a coastal Synechococcus popula